Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015893956.1_cds_XP_016447471.1_42228
CDS Infomation

[gene=LOC107772479] [db_xref=GeneID:107772479] [protein=putative ankyrin repeat protein RF_0381] [protein_id=XP_016447471.1] [location=join(120920..122003,122609..123138)] [gbkey=CDS]
Sequence

ATGGATCGACTATTAAGCTTAGAACCATCAAATCTTGTGACGATAAGACTTGAACCAGGT
CAAAAGTGTTCTGGAGAATTAACTCTCCGTAACGTCATGTACACCATGCCAGTGGCTTTC
CGACTACAGCCAGTGAACAAGACACGTTACTCGATCCGTCCTCAATCGGGTATCATCTCA
CCATTAACCACAATCACATTGGAGATCATTTACCATCTCCCTCCAAACACAACTCTCCCT
AATTCTTTCCCTCACTCTGATGATTCATTCCTCTTACGTAGTGTTGTTGCCCCTGGAGCT
GCTATAAATAAGGACCCTTGTTCCACTTTAGACATGGTCCCAAGTGATTGGTTCACAACT
AAGAAAAAACAAGTTTTCATTGATAGTGCTATTAAAATCATGTTTGTTGGTTCACCTGTA
TTGTGTTATCTTGTAAAAAAAGGTTATATGGATGAAATTAGGGAAGTATTAGAAAAAAGT
GACCCTAATTGGAAACCAGTTGATTCAGTTGACTTTGAAGGTCAAACTTTACTTCATTTA
GCTATTTCACAAAGCAGGCCTGATCTTGTACAATTGTTACTTGAATTTGGACCTAATATT
GAGGCCCATAGTAAATCATGTTCAAGACCACTTGAAACAGCAGCAGCAACAGGAGAATCA
CTAATTGTTGAACTCTTATTAGCTAAAAAAGCAAGCACAGAAAAAACAGAGTTCTCTGCT
TCTGGCCCAATACATTTAGCAGCAGGAAATGGTCATTTGGAAGTAGTAAAACTGCTTCTA
CTCAAAGGGGCTAATGTGAATGCACTAACAAAAGACGGGAACACGGCTTTGCACCTCGCT
GTTGAAGAACGAAGGAGAGATTGTGCGCGTCTTTTGTTGGCGAATGGTGCTGGAGCTGAT
GTGCGGAATGCTAGGAATGGTGACACGCCTTTGCATATTGCTTCTGGTTCGGGAGATGAA
CAGATGGTTCGGGTTTTACTTCAAAAGGGAGCTGAGAAGAATATACGTAACAAGTATGGC
AAAACGGCTTATGATGTTGCTGCTGAACATGGCCATAACAAGCTCTTTGACGCCCTCCGT
TTAGGGGACAGCCTATGTGTGGCGGCTAGAAAAGGAGAGGTAAGAACCATACAAAGGCTG
CTAGAGAATGGAGCTAACATAAATGGACGTGACCAACACGGTTGGACTGCATTGCACAGG
GCATGTTTCAAAGGAAGAATAGAAGCTGTAAAGGCATTAATAGACCATGGAATTGATGTA
AATGCAAGGGATGAAGATGGATACAGTGGATTGCACTGTGCAGTGGAATCTGGTCATGTT
GATGTAGCCGAGTTGCTAATTAAAAAAGGTGCAGACATTGAGTCAAGAACTAGTAAAGGG
ATTACTGCATTGCAAATTGCAGAGTCACTTCATTATTCTGGTCTCACTAGAGTACTCATG
CAAGGAAGTGTAGTTAAAGAACAAGTTGGGACAATGGAGATAAATTTTGTGAAATCATCT
GGGAAAATGGCTGTTAAAGATATAGAAATTGGGAATGTCAAGAAAAGATCTATTAATAAA
TCAAGAGTTCGGAGGAGTAGCTTTGATAGAACTGTTCCATTGGCTGTTGTGTGA

Peptide Sequence

PEP ID

XP_016447471.1
PEP Infomation

PREDICTED: putative ankyrin repeat protein RF_0381 [Nicotiana tabacum]
Sequence

MDRLLSLEPSNLVTIRLEPGQKCSGELTLRNVMYTMPVAFRLQPVNKTRYSIRPQSGIIS
PLTTITLEIIYHLPPNTTLPNSFPHSDDSFLLRSVVAPGAAINKDPCSTLDMVPSDWFTT
KKKQVFIDSAIKIMFVGSPVLCYLVKKGYMDEIREVLEKSDPNWKPVDSVDFEGQTLLHL
AISQSRPDLVQLLLEFGPNIEAHSKSCSRPLETAAATGESLIVELLLAKKASTEKTEFSA
SGPIHLAAGNGHLEVVKLLLLKGANVNALTKDGNTALHLAVEERRRDCARLLLANGAGAD
VRNARNGDTPLHIASGSGDEQMVRVLLQKGAEKNIRNKYGKTAYDVAAEHGHNKLFDALR
LGDSLCVAARKGEVRTIQRLLENGANINGRDQHGWTALHRACFKGRIEAVKALIDHGIDV
NARDEDGYSGLHCAVESGHVDVAELLIKKGADIESRTSKGITALQIAESLHYSGLTRVLM
QGSVVKEQVGTMEINFVKSSGKMAVKDIEIGNVKKRSINKSRVRRSSFDRTVPLAVV

Transcript Sequence

Gene sequence data has not been registered.